Results for "DNA String"
Top-level pages
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scien...uplications of simple sets of DNA bases (typically 1-5bp) such...ce of a reverse transcriptase.DNA TransposonsRetrovirus Retrotr...nscription by RNA polymerase, DNA strands have upstream and dow...ucleases) designed to cut the DNA st...2255 days ago
- ...d Alignment Report. A compact string that (partially) summarize...encing, both ends of a single DNA or RNA fragment are sequenced...s where both ends of a single DNA or RNA fragment are sequenced, b...ocess where only one end of a DNA or RNA fragment is sequenced. Co...
2913 days ago
Genome Assembly Tools and Software - PART1 !!
...itable for comparison. DNA Baser 4.36 – DNA Sequence Assembly & Analy...e StriDe Assembler integrates string and de Bruijn graph by decomp...from short sequence reads by stringently assembling them into con...hasing genomic variants using DNA sequencing reads, also called ha...2730 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be exe...set consec cntr to 1 set ascending cntr to 1 putchar first char of string to screen set read char...2703 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Su...difier. $` Prematch for last successful match string (degrades performance)....ifier. $' Postmatch for last successful match string (degrades performance)....2688 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have origi...ly reflects evolutionary history. cDNA -- Complementary DNA; DNA that is synthesized, by...sequence isolated at random from a cDNA library, used for identificat...o with any other clade. repetitive DNA --...2506 days ago
Edit distance application in bioinformatics !
There are other popular measures of ...bstitution, hence, it only applies to strings of the same length. the&nbs...SEQ2 ); # ref to array my $lcss_string = LCSS( $STR1, $STR2 ); #...mplementation of the same interface. String::Similarity takes two st...2385 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynami...of business logic, URL and request routing, and output. The days of slinging a string here, an array there, a Perl...2366 days ago
PerlOneLiner for Bioinformatician
FILE SPACING------------ # Double space...gt;8*($_))&0xFF) } reverse 0..3' STRING CREATION AND ARRAY CREATION--....."z")' # Generate and print all the strings from "a" to "zz"perl -le 'pr.../) { say "valid ip";} # Check if the string looks like an email address/\...2346 days ago
List of visualization tools for network biology
Network analysis is any structured technique used...of chemicals and proteins http://stitch.embl.de/ STRING Protein interaction networks...vious knowledge derived from the literature http://string-db.org TVNViewer An i...2332 days ago
