Software packages for next gen sequence analysis
...xt Generation Sequencing data analysis. * JMP Genomics - Next gen visual...ating with Lasergene Sequence Analysis software for additional analysis...on desktop computer. From the Evolutionary Genomics Lab at Sun-Yat S...hort sequence reads. From the Evolutionary Genomics Lab at Sun-Yat S...3269 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to und...e one leading method in -omics data analysis and visualization. Followi...w.biotapestry.org/ Caleydo Visual analysis framework targeted at biomole...PathVisio Biological pathway analysis software that allows drawing,...2314 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological fun...d quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2229 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...can be directly imported for analysis.” Alignment feature: Suppo...m NCBI Ingenuity Variant Analysis (QIAGEN) allows for variant id...ion: Protein ANalysis THrough Evolutionary Relationships; Web app pr...variants prior to statistical analysis of sequence based disease ass...2935 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation ...of using GeneSCF over other enrichment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2898 days ago
2896 days ago
Genome Assembly Tools and Software - PART1 !!
...; DNA Sequence Assembly & Analysis DNA Sequence Assembler is revolutionary bioinformatics software for a...en sequence assembly tool for evolutionary genomics. Designed especi...Genome Assembly and Variation Analysis Cortex is an efficient and...2712 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softw...ilities for Next-Generation Sequencing (NGS) data analysis masukomi/jsonpath-perl ...ern Perl Framework for High Throughput Sequencing analysis gbarr/perl-libnet - per...2516 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...system that ideally reflects evolutionary history. cDNA -- Complementa...m, resulting from a cladistic analysis, which depicts a hypothetical bra...f man to the origin of life. evolutionary tree -- A diagram which depic...haracters used in a cladistic analysis, either original or derived....2489 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-s...hylogenetic trees using SNPs (based on k-mer analysis) Software (C) https://sourc.../mash Kraken Taxonomic assignment in metagenome analysis by exact k-mer search; L...2398 days ago