Results for "Microarray Data Analysis"
Top-level pages
Since few years miRNA has shown to play important...related with miRNA: miRNA Sequencing data analysis : http://tools.genxp...ml Idea of analysing miRNA Sequencing data : http://www.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.bioco...3538 days ago
Apps for Busy Bioinformatics Researchers !!!
...at allows for the opening and analysis of DNA sequencing files -...ns, COSMIC mutations, and CNV data for cell lines. Does not req...network connection for local databases. View and search PubMed in...mic Variations and many other databases to retrieve up-to-date annot...3583 days ago
- Pathway Analysis is usually performed with aim to enrich the genes wit...bioinformatics.mdanderson.org/MicroarrayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...earch/index.html?q=Enrichment+analysis+
3538 days ago
A guide for complete R beginners !
...d to perform some basic analysis: load a table, plot some...lication specific tasks. e.g. analysis of microarray experiments and Next-Ge...sc/Rcmdr/ and Limma-gui (microarrays) : http://bioinf.wehi.edu....ownload and save the tutorial data set from http://bioinformatics...3403 days ago
Software packages for next gen sequence analysis
...or Next Generation Sequencing data analysis. * JMP Genomics - Next ge...e genomes, and carry out post-analysis. ZOOM is developed to be high.... Supports Illumina and SOLiD data. De novo Align/Assemble * ABySS...pecifically optimized for the analysis of large numbers (millions) o...3284 days ago
Comprehensive list of visualization tools for biological pathways
...one leading method in -omics data analysis and visualization. Fol...apestry.org/ Caleydo Visual analysis framework targeted at biomolecular data. Visualization of interdepend...bsp; Mapping and visualizing microarray gene-expression data and in...2329 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biologic...and quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2244 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It...erleaved files It is multithreaded and can process data at...
2756 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...quo;one can import the sample data in FASTA, FASTQ or tag-count format. In addition, prealigned data in SAM, BAM or Illumina-specific EL...BED, Agilent files, NimbleGen data summary files, VCF files, Impute2...om high-throughput sequencing datasets; calls variants found in <...2951 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering b...organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" module, 1) https://www.b...ent tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2914 days ago
