Results for "ngs data analysis"
Top-level pages
Since few years miRNA has shown to play imp...s related with miRNA: miRNA Sequencing data analysis : http://tools.genxp...tml Idea of analysing miRNA Sequencing data : http://www.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.bioco...3520 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad...at allows for the opening and analysis of DNA sequencing files -...ns, COSMIC mutations, and CNV data for cell lines. Does not req...network connection for local databases. View and search PubMed in...mic Variations and many other databases to retrieve up-to-date annot...3565 days ago
- ...ranscriptomics and proteomics data, interactions between genes i...ayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...ys_2014_Module2.pdf Impotant Database and Tools: GeneMANIA, Cytosc...earch/index.html?q=Enrichment+analysis+
3520 days ago
A guide for complete R beginners !
This tutorial is intended to intr...d to perform some basic analysis: load a table, plot...lication specific tasks. e.g. analysis of microarray experiments...again and again on different data Disadvantages Lack of a...ownload and save the tutorial data set from http://bioinformatics...3385 days ago
Software packages for next gen sequence analysis
...or Next Generation Sequencing data analysis. * JMP Genomics - Next ge...e genomes, and carry out post-analysis. ZOOM is developed to be high.... Supports Illumina and SOLiD data. De novo Align/Assemble * ABySS...pecifically optimized for the analysis of large numbers (millions) o...3266 days ago
Comprehensive list of visualization tools for biological pathways
...one leading method in -omics data analysis and visualization. Fo...apestry.org/ Caleydo Visual analysis framework targeted at biomolecular data. Visualization of interdepend...bsp; Visualizing multi-omics data in metabolic networks https://ww...2311 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biologic...and quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2226 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It...erleaved files It is multithreaded and can process data at...
2738 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...lignment, variant calling and analysis of NGS data Supported workflows incl...om high-throughput sequencing datasets; calls variants found in <...udying using ion channels for analysis of single RNA/DNA structures)...ariants in pool or individual NGS data, reports overall p-value, ope...2932 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Cluste...organisms from V1.1. Examples to download database as simple text file using GeneSCF "prepare_database" module, 1) https://www.b...ment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2895 days ago
