Results for "transcriptome analysis"
Top-level pages
Comprehensive list of visualization tools for biological pathways
...e leading method in -omics data analysis and visualization. Following ar...otapestry.org/ Caleydo Visual analysis framework targeted at biomole...Visio Biological pathway analysis software that allows drawing,...T Integrated analysis of transcriptome data in genomic, proteom...2322 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological func...d quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2238 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...can be directly imported for analysis.” Alignment feature: Suppor...udying using ion channels for analysis of single RNA/DNA structures)...K) Output: Downstream Analysis of Variants PrediXcan D...variants prior to statistical analysis of sequence based disease ass...2944 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation ...of using GeneSCF over other enrichment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2907 days ago
- alignment: the mapping of a raw sequence read to a location within a reference genome. The...ions of sequences at once. DeepSequencing Techniques of nucleotide sequence analysis that increase the range, comp...
2904 days ago
Genome Assembly Tools and Software - PART1 !!
...; DNA Sequence Assembly & Analysis DNA Sequence Assembler is revol...uence assembly , DNA sequence analysis, contig editing, file format conve...TransPS 1.1.0 – Transcriptome Post Scaffolding TransPS i...t-processing of pre-assembled transcriptomes using reference based method...2721 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softwa...ilities for Next-Generation Sequencing (NGS) data analysis masukomi/jsonpath-perl ...ern Perl Framework for High Throughput Sequencing analysis gbarr/perl-libnet - per...2525 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two t...diagram, resulting from a cladistic analysis, which depicts a hypothetical...methods. ingroup -- In a cladistic analysis, the set of taxa which are hy...s of characters used in a cladistic analysis, either original or derived....2497 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...fication at transcript-level (partitions the transcriptome into disjoint transcript clus...enetic trees using SNPs (based on k-mer analysis) Software (C) https://sourc...Kraken Taxonomic assignment in metagenome analysis by exact k-mer search; L...2407 days ago
Single Cell RNAseq data analysis tutorial !!
...ful links: Single Cell RNAseq data analysis Tutorial A step-by-step workflow for low-level analysis of single-cell RNA-seq data...arly/2016/11/15/087775 Single cell transcriptomes identify human islet ce...d evaluation in single-cell RNA-seq analysis https://github.com/zji90/TSC...2386 days ago
