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  • Using Interval Trees to Query Genome Annotations by Position

    To work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malariagen.net/2011/07/07/using-interval-trees-to-query-genome-...y-position/ http://hackmap.blogspot.de/2008/11/python-interval-tree.html http://en...

    3591 days ago

  • Apps for Busy Bioinformatics Researchers !!!

    DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files...s?id=bii.seqdatreader&hl=en BioGene:iPhone/iPad BioGene...ex quickly provides information about genes from various sour...tabase (www.yeastgenome.org) in an on bound app database. As...

    3584 days ago

  • Pathway Analysis

    Pathway Analysis is usually performed with aim to enrich the genes with their functional infor...t also to disclose the relationships between these genes. Wit...gene products. However, existing tools and dbs mainly based o...y%20Analysis.pdf http://gettinggeneticsdone.blogspot.de/2012...

    3538 days ago

  • List of Biotechnology Research Laboratory, University, and Centre in India

    DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( I...search Institute, Dhanbad - Central Scientific Intruments II...Central Power Research Institute Center for Artificia...h Palakkad Fluid Control Research Institute...

    2613 days ago

  • MOTIF 2015 – NATIONAL SEMINAR ON BIOINFORMATICS & BIOPHARMACEUTICALS -NSBB’15

    ...Motif’15? The program  “MOTIF” is an annual event conducted by the Department. It is unique in the sense t...idance by the faculty. The event is meant to expose students...a post.Those who wish to present a paper or poster are reques...

    3415 days ago

  • A guide for complete R beginners !

    This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that  biologists need to perform  some basi...me basic statistics. More extensive tutorials can be found on...mcmaster.ca/jfox/Misc/Rcmdr/ and Limma-gui (microarrays)...

    3404 days ago

  • Rosalind Problem Solution with Perl

    Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how R...rks. Bioinformatics Textbook Track Find more about Rosalind puzzle a...he Rosalind problem with Perl for community. Check out the right side...

    3295 days ago

  • Software packages for next gen sequence analysis

    Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Co...atform offered by the Malaysian based Synamatix. Will align I...ial resolution of predicted binding sites. MACS also uses a d...

    3285 days ago

  • Comprehensive list of visualization tools for biological pathways

    ...logical pathways is a key to understand the different processes inside a cell: proteins exert their function not in...pes are metabolic pathways, gene regulatory pathways, and sig...onment for biochemical reaction networks http://jdesigner.so...biological pathway diagrams in a visual way and the annotati...

    2329 days ago

  • List of Bioinformatics Software Tools for Next Generation Sequencing

    Commercial tools Strand NGS offers many different tools including alignment, R...F SOAPindel Description: detects indels from NGS pair...t: VntrSeek Description: pipeline for discovering mic...VAAST) VEP Description: (Ensembl) Variant Effect Pre...

    2951 days ago