Results for "AP"
Top-level pages
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at...xact repeat somewhere, reads mapping to it will be mapped ambi...is a tool that bins reads by mapping to multiple references si...nella reads)clean.fq (unmapped reads)In this case, "int=t...2345 days ago
PerlOneLiner for Bioinformatician
...ld with its absolute valueperl -alne 'print "@{[map { abs } @F]}"' # Find the to...umber of fields that match a patternperl -alne 'map { /regex/ && $t++ } @...te a random 8 character passwordperl -le 'print map { ("a".."z")[rand 26] } 1..8'...2333 days ago
List of visualization tools for network biology
...ollowing are the list of standalone applications for network analysi...mics http://www.copasi.org/ Cytoscape Network visualization...system, dynamic and hierarchical graph. https://gephi.org Igraph...ernal data http://tinyurl.com/yEdGraph/ Web tools for network anal...2319 days ago
List of visualization tools for genome alignments
...results: ABySS Explorer Interactive Java application that uses a novel graph-based representation to disp...for regional genomic sequences http://bioapp.psych.uic.edu/DNannotator.ht...zing sequenced human genomes http://www.svaproject.org Viewer (IGV) ...2315 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...show the manual for command df — show disk usage du — show directory space usage free — show memory and swap usage whereis app — show possible l...2312 days ago
Awk for Bioinformatician and computational biologist
...TTcontig3contig4 ACTTATATATATATAcontig5 ACTTTATATATTYou can have as many blocks as you want and they will be executed on each line in the order they appear, for example, if we want...2311 days ago
Computational resources for TE discovery and TE detection
...Scout http://repeatscout.bioprojects.org/ repeat-match http://mummer.sourceforge.net/ REPuter http://www.genomes.de/ RetroMap http://www.burchsite.com/bioi/RetroMapHome.html SMaRTFinder http:/...2305 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...Feb 2018, 9 AM CETSession 2: 28 Feb 2018, 8 AM PSTRegister here: http://www.strand-ngs.com/webinar_registration About Speaker: Dr. Suman Kapoor, Manager- Application Science at Strand Li...2295 days ago
Python learning resources for bioinformatics and computational biologist !
...to build productivity tools, games, and desktop apps, so there are plenty of res... - Al Sweigart Biopython (PDF) Build applications in Python the antit...thon - David Mertz (2.3 - 2.x) The Coder's Apprentice: Learning Programming...2286 days ago
- ...r G or T D.................A or G or T H.................A or C or T V.................A or C or G N.................any base . or -............gap Protein: Amino Acid Code: T...
2276 days ago
