3988 days ago
3987 days ago
Bioinformatics Companies in India
.... The companies name order does not follow any specific pattern. 1. Accelrys So...6. Kshema Technologies#1, Global Village, Mylasandra, Mysore Road, Bangalore-560...esciences.com 21. Molecular Connections P LtdKandala Mansion, 2/2 Kariappa Road, Nea...3967 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...on reads] Readjoiner: a fast and memory efficient string graph...gene of interest] Detecting and annotating genetic variations usin...cal data in R. Many books on specific topics in R programming are a...st for over-representation of specific ontology categories among gen...3820 days ago
List of In-silico Binding Site Prediction Tools
...metric method to extract site-specific spatial patterns of spli...ased on binding site sequence and structure conservation. 3DLi...rities with the query protein and generates structure-based ali...tion Fields map with EasyMIFs and carry out binding site identificat...3785 days ago
Commercial and public next-gen-seq (NGS) software
...pression, Copy Number, Allele-Specific Copy Number, LOH, Association, Trio Analysis, and Tiling. Supports all commerci...ack to the reference genomes, and carry out post-analysis. ZOOM is d...n University. This version is specifically optimized for the analysi...3560 days ago
3537 days ago
A guide for complete R beginners !
...found on the project website and via bioconductor (not covered...reated to perform application specific tasks. e.g. analysis of microarray experiments and Next-Gen sequencing (biocondu...ration (Optional) Download and save the tutorial data set from...3402 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...data in SAM, BAM or Illumina-specific ELAND format can be directly import...Copy number including allele specific copy number and Loss of Heterozygosity (LOH),...CLImAT Description: standalone program; “accurate dete...s localized micro-assembly of specific regions of interest; can do s...2950 days ago
Tools for Searching Repeats And Palindromic Sequences
...r whether the nucleic acid strand is read starting from the 3'...nd to the 3' end. Because of specific base pairing in DNA (i.e...ences on the complimentary strands read the same in either direction...y are the site of binding for specific enzymes (e.g., restriction en...2252 days ago