3974 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living...nismal lineages as they change through time.Every living organism contains DNA, RNA, and proteins. Closely relate...3973 days ago
Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked s...y/riley.html www.tulane.edu/~biochem/nolan/lectures/rna/intro.htm http://lenti.med.u...from the beginning Central Dogma Glossary About RNA www.imsb.au.dk/~raybrown/...3157 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...qually relevant to animal and microbial systems] Sense from sequ...stical design and analysis of RNA sequencing data. Auer & Doe...h transcriptome assembly from RNA-Seq data without a reference ge...set of tools for analysis of microarray and high-throughput se...3806 days ago
List of bioinformatics open source projects/software.
...m/b/msr_er/archive/2011/10/18/microsoft-biology-foundation-evolve...atics toolkit built using the Microsoft 4.0 .NET Framework to hel...al genomics experiments, e.g. RNA-seq or ChIP-seq. GeneTalk htt...ng a supra-hexagonal map Taverna workbench Tool for designing...3783 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/...EERS was designed to benchmark RNA-Seq alignment algorithms and...uct different isoforms and alternate splicing from RNA-Seq data...the experimental pipelines for RNA-Seq, employing a minimal set...ww.ebi.ac.uk/projects/bargen/kernalPop A spatially explicit popu...3764 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NG...owsers and file formats (such as GFF). See the Small RNA Profiling exercise for an exa...Ontology (GO) terms, find the nearest gene, exon, miRNA or custom features such as mo...3651 days ago
Commercial and public next-gen-seq (NGS) software
...Commercial software for NGS, microarray, and qPCR data analysis....ysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele...ime to update this list. Alternate Base Calling Rolexa - R-bas...3545 days ago
3522 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...Biology) IMT - Institute of Microbial Technology, Chandigarh...n Council for Research on International Economic Relations Indi...Institute of Technology International Centre for Genetic Engine...e of Agriculturally Important Micro-Organisms (NBAIMO Ce...2597 days ago