Comment on "List of gene ontology software and tools"
...ction of GO tools. I found FuncAssociate also very useful. It is a web-based tool to help researchers use Gene Ontology attributes to characterize large sets of genes derived from ex...3319 days ago
Comment on "Software packages for next gen sequence analysis"
DNAMAN uses fast alignment algorithms to assemble quickly and accurately a large number of overlapping sequences. This could be a nice tutorial for genome assemblies with overlapping sequences http://www.lynnon.com/pc/assembly.html3378 days ago
Comment on "Which Bioinformatics Journals Do You Follow?"
These are several journals I follow. One can see that Nature journal cover a very large spectra of audiences. Apart from that, I do like browsing Bioinformatics BMC Bioinformatics BMC Genomics BMC Systems Biology Cancer Research Genome Biology Genome Research3451 days ago
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Comment on "List of popular bioinformatics software/tools"
EpiExplorer is a web tool that allows you to use large reference epigenome datasets for your own analysis without complex scripting or laborous preprocessing. http://epiexplorer.mpi-inf.mpg.de/3820 days ago
Comment on "Latest paper on comparison of mapping tools"
...duce the BioPig sequence analysis toolkit as one of the solutions that scale to data and computation. BioPig: a Hadoop-based analytic toolkit for large-scale sequence data http://bi...3947 days ago
Comment on "Five unique traits of effective computational biologist"
.... (2002) Bioinformatics: biology by other means. Bioinformatics. 18(12):1551-2. [link] Huttenhower C, Hofmann O (2010) A Quick Guide to Large-Scale Genomic Data Mining.PLo...3968 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
...is using Perl, therefore I prefer PDL ("Perl Data Language"), which gives standard Perl the ability to compactly store and speedily manipulate the large N-dimensional data arrays whi...4022 days ago
Comment on "R and Bioconductor Tutorial"
Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or sets of sequences. http://www.bioconductor.org/packages/2.12/bioc/html/Biostrings.html4041 days ago
Comment on "What is the objective of BINC examination?"
.... Currently, various universities and institutions, both government and private, impart Bioinformatics education in India. However, there exists a large variation in the course conte...4056 days ago