Barrnap: Bacterial ribosomal RNA predictor
...ion of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA seq...2587 days ago
SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
SHAMAN is a shiny application for differential analysis of metagenomic data (16S, 18S, 23S, 28S, ITS and WGS) including bioinformatics treatment of raw reads for targeted metagenomi...1394 days ago
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...gi type and reference material *28S ribosomal RNA sequences (LSU)...1570 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...rd_party_DB/taxdump' ); #Install silvaDB #https://www.arb-silva.de/no_cache/download/archive/release_138_1/Exports/ #LSU: Large subunit (23S/28S ribosomal RNAs) #SSU: Small...1198 days ago
1092 days ago