Tadpole is 250x faster than SPADes assembler !
lege@jit-Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/Vir$ tadpole.sh Written by B...This will be passed to Java to set memory usage, overriding the program's automatic memory detection....1028 days ago
1002 days ago
Command line to create blast uniref database !
#The NCBI BLAST+ distribution does not include 'blastpgp', it has been replaced by the 'psiblast' program. The 'blastpgp' program is available in the legacy NC...1002 days ago
Get the Linux system information !
#!/bin/bash # while-menu-dialog: a menu driven system information program DIALOG_CANCEL=1 DIALOG_ES...OG_CANCEL) clear echo "Program terminated." exit...IALOG_ESC) clear echo "Program aborted." >&2 exit 1...1000 days ago
971 days ago
Install Install Gffcompare on Ubuntu / Linux
#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compatible with...875 days ago
Install StringTie on ubuntu / Linux !
#StringTie is a software program to perform transcript assembly and quantification of RNAseq data. The b...can just download this distribution and extract it. Like with our other programs we also make a symlink to ma...875 days ago
Install Varscan on Ubuntu / Linux !
#Varscan is a java program designed to call variants in sequencing data. It was developed at the Gen...the distributed jar file into our ~/workspace/bin. As with the other java programs which have already been inst...875 days ago
864 days ago