1397 days ago
Print the screenshot of read coverage remotely !
#Chrom_2:9700000-9760000 ASCIIGenome -ni --fasta A_vaga.NDPD.fasta -r Chrom_2:9700000-9760000 -x "save >> test.pdf" A_vaga.NDPD.fasta.out.sam.bam.sorted.bam1340 days ago
Install SibeliaZ in your Linux cluster !
...lecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen s...failed with repodata from current_repodata.json, will retry wit...b0_3 155 KB maf2synteny-1.0 | he1...epends-2019.10-py27_0 maf2synteny bioconda/linux-64::...1289 days ago
1273 days ago
1273 days ago
1273 days ago
Install trimmomatic using conda !
(JitMetaENV) ➜ fastQC_out conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1273 days ago
1273 days ago
1273 days ago
Install assembly-stats with conda !
(JitMetaENV) ➜ META_PE conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1273 days ago