Results for "usage"
Bio-Scripts
Long reads mapper bash script !
#!/bin/bash #only for LONG READS mapping #USAGE: runMapper.sh minimap2 ref.fa reads.fa/fq 48 ont echo...$# -lt 5 ]; then echo "No or less arguments provided" echo "#USAGE: runMapper.sh minimap2 ref.fa...2167 days ago
- ...pping based (if --left and --right are given) 3. reference based (if --reference is given) Documentation at http://hibberdlab.com/transrate USAGE: transrate OPTIONS: -...
2167 days ago
Resume the MIRA assembler run !
mira -r manifest_file Usage: mira [options] manifest_file [manifest_file ...] Options: -c / --cwd= directory Change working directory -r / --resume...1778 days ago
Installing Porechop on Ubuntu !
...echop-0.2.3-py3.6.egg-info running install_scripts Installing porechop script to /home/urbe/anaconda3/bin ➜ Porechop git:(master) porechop -h usage: porechop -i INPUT [-o OUTPUT...2150 days ago
- ...endra-UNLOCK-INSTALL[gatk-4.0.2.1] ./gatk [] Usage template for all tools (uses...unner LOCAL when used with a Spark tool) gatk AnyTool toolArgs Usage template for Spark tools (wil...
2119 days ago
- ...low On_IBlue='\033[0;104m' # Blue On_IPurple='\033[0;105m' # Purple On_ICyan='\033[0;106m' # Cyan On_IWhite='\033[0;107m' # White #Usage echo "${Green}Working on tes...
2062 days ago
Installing docker for Bioinformatics on Ubuntu !
...for more information. jit@jit-HP-Pro-3335-MT:~/Downloads$ docker Usage: docker [OPTIONS] COMMAND...ontainers stats Display a live stream of container(s) resource usage statistics stop Sto...1557 days ago
Perl script to reads and extract webpage contents !
use 5.010; use strict; use warnings; use WWW::Mechanize; my ($url) = @ARGV; die "Usage: $0 URL\n" if not $url; my $w = WWW::Mechanize->new; $w->get($url); say $w->content; #Run #jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ perl web.pl https://bioinformaticsonline.com1557 days ago
Pack a perl program with their dependencies on Ubuntu !
...Remember me Register Lost password Latest files analyzing codon usageBy Neelam Jha 130 days ago analyzingcodonusage perl script analyzing...1555 days ago
- ...uests to: https://github.com/jnarayan81/autoConTAMPR/issues Operating system: linux Perl executable at: /usr/bin/perl Please check manual. Usage: autoConTAMPR.pl --valid...
1553 days ago
