Comment on "Computer simulation of genetic mechanism !!"
Thanks for the list. I came across GPOPSIM: a simulation tool for whole-genome genetic data ( http://bmcgenet.biomedcentral.com/articles/10.1186/s12863-015-0173-4&nb...3067 days ago
3070 days ago
Comment on "List of popular bioinformatics software/tools"
MEDIPS: genome-wide dierential coverage analysis of sequencing MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments https://www.bioconductor.org/packages/3.3/bioc/vignettes/MEDIPS/inst/doc/MEDIPS.pdf3136 days ago
3147 days ago
Comment on "Software packages for next gen sequence analysis"
Broad Institute listed many new tools for genome assembly, please all at http://www.broadinstitute.org/scientific-community/software?criteria=Assembly3155 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
A Fugu–Human Genome Synteny Viewer: web software for graphical display and annotation reports of synteny between Fugu genomic sequence and human genes http://nar.oxfordjournals.org/content/32/8/2618.short3334 days ago
Comment on "Software packages for next gen sequence analysis"
DNAMAN uses fast alignment algorithms to assemble quickly and accurately a large number of overlapping sequences. This could be a nice tutorial for genome assemblies with overlapping sequences http://www.lynnon.com/pc/assembly.html3378 days ago
Comment on "Bio++ : C Language libraries for your biological need"
MafFilter is a program to process genome alignment in the Multiple Alignment Format. Current version is 1.1.2 http://biopp.univ-montp2.fr/forge/maffilter3378 days ago
Comment on "R and Bioconductor Tutorial"
Genes and genome with R https://www.ebi.ac.uk/training/sites/ebi.ac.uk.training/files/materials/2013/131021_HTS/genesandgenomes.pdf3379 days ago
Comment on "Software packages for next gen sequence analysis"
Genome assemblies tool and related papers at http://www.plosone.org/browse/Sequence+assembly+tools?startPage=53&filterAuthors=&filterSubjectsDisjunction=&filt...3381 days ago