Blast script to index and extract sequence !!
...ut EC -in EC4115.fa -parse_seqids # retreive an entry by id $ blastdbcmd -db EC -entry 'NC_011353.1' |...AGAC .... # query the blast database by id and coordinates $ blastdbcmd -db EC -range 100-105 -entry...2881 days ago
Perl script to find palindromic regions in DNA sequences
use strict; use warnings; my $pp = qr/(?: (\w) (?1) \g{-1} | \w? )/ix; my $filename = $ARGV[0]; open(my $fh, '2184 days ago
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Installing Busco version 4.0.6
...conda/linux-64::perl-file-temp-0.2304-pl526_2 perl-getopt-long bioconda/linux-64::perl-getopt-long-2.50-pl526_1 perl-ipc-cmd bioconda/linux-64::perl-ipc-cmd-1.02-pl526_0 perl-json-pp...1482 days ago
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