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Results for "Split-Read"

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• • Jit@jit.aber

  

  Split the bam file by chromosome. $ bamtools split -in file.bam -reference #Split #Bam #Bamtools

  2641 days ago

• • Jitendra Narayan@admin

  

  An interesting read "Genetic Improvement of Computational Biology Software "http://www0.cs.ucl.ac.uk/staff/w.langdon/ftp/papers/langdon_2017_ECCSB.pdf #Bioinformatics

  2566 days ago

• • Jit@jit.aber

  

  Split the file in Linux with size. $ split --bytes=50M aaaa.fa #split #linux #size

  2514 days ago

• • Rahul Agarwal@raag

  

  Learn D3.js - https://leanpub.com/D3-Tips-and-Tricks/read #D3dotJS #visualisation #plot

  2308 days ago

• • Rahul Nayak@rahul

  

  #Split #multifasta $ cat hg18.fa | awk '{ if (substr($0, 1, 1)==">") {filename=(substr($0,2) ".fa")} print $0 > filename }'

  2236 days ago

• • Jit@jit.aber

  

  #Short #read #alignment: an #introduction https://www.sevenbridges.com/short-read-alignment-algorithms/

  2192 days ago

• • Jit@jit.aber

  

  perl -e '$/="\n>"; while (<>) { s/>//g; my ($id, $seq) = split /\n/; print ">$_" if length $seq; }' < all_p_ctg.fasta > all_p_ctg_corrected.fasta #Convert #Fasta #Zero

  2157 days ago

• • Jit@jit.aber

  

  Long read extraction https://github.com/rrwick/Unicycler/wiki/Read-extraction #Reads #Extractions #Long #PacBio #Ont

  2124 days ago

• • Abhimanyu Singh@abhimanyu

  

  Efficiency of #PacBio long read #correction by 2nd generation #Illumina sequencing https://www.sciencedirect.com/science/article/pii/S0888754317301660

  2086 days ago

• • BioStar@biostar

  

  Split the fasta $ pyfasta split -k 100 -o 20 input.fasta -n 1 #split #pyfasta #overlaps

  2067 days ago

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