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• • Jit@jit.aber

  

  #Remove all line that start with # file: $ sed '/^#/ d' filename #line #sed #linux

  2637 days ago

• • Jit@jit.aber

  

  Remove four beginning characters from each line of the file. $ sed 's/^....//' genbank.txt #Remove #Sed #Text

  2533 days ago

• • BioJoker@biojoker

  

  Print the lqst line of the file zith Perl. $ perl -ne 'END {print $last} $last= $_ if /\S/' blocks_coords.gff #Last #Line #Perl

  1782 days ago

• • Rahul Nayak@rahul

  

  #Convert #fasta file to uppercase/lowercase, without altering the annotation line $ awk '{ if ($0 !~ />/) {print toupper($0)} else {print $0} }' name.fasta

  2263 days ago

• • Rahul Agarwal@raag

  

  https://web.expasy.org/cellosaurus/- a knowledge resource on cell lines #Cell #line #DB

  2255 days ago

• • Neelam Jha@neelam

  

  #Convert a #multi-line #fasta to a #singleline #fasta $ awk '!/^>/ { printf "%s", $0; n = "\n" } /^>/ { print n $0; n = "" } END { printf "%s", n }' sample1.fa > sample1_singleline.fa

  2181 days ago

• • Jit@jit.aber

  

  #tBLASTn #command line $ tblastn -query Avaga.pep.out.45.fa -db myDB -outfmt 6 -out output_file -evalue 1e-5 -max_target_seqs 1 #Blast #Protein

  2166 days ago

• • Rahul Nayak@rahul

  

  Multi-line fasta to single line fasta $ perl -pe '/^>/ ? print "\n" : chomp' in.fasta | tail -n +2 > out.fasta #Multiline #Singleline #Fasta

  2097 days ago

• • BioStar@biostar

  

  Remove empty line from fasta. $ sed -i '/^$/d' standard_output.final.scaffolds_online.fasta #Empty #Fasta #Remove

  2080 days ago

• • Abhimanyu Singh@abhimanyu

  

  Using R: #plotting the #genome on a line https://www.r-bloggers.com/using-r-plotting-the-genome-on-a-line/ . #plot #R

  1889 days ago

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