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Results for "Genome Sequence"

Wire posts

  • Abhimanyu Singh

    Assembly tutorial https://insidedna.me/tutorials/view/benchmark-seven-popular-genome-assemblers

    2904 days ago

  • Jit

    What is genome? http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006181 #Genome #Definition #Genetics #Bioinformatics #Plos

    2900 days ago

  • Shruti Paniwala

    Long-read human genome sequencing and its applications https://www.nature.com/articles/s41576-020-0236-x #LongReads #Sequencing #Genome #Review

    1485 days ago

  • Shruti Paniwala

    Genome basic stats http://www.cbs.dtu.dk/courses/genomics_course/Day3.pdf #Genome #Stats #Plot #R

    2870 days ago

  • Poonam Mahapatra

    Gaze for gene prediction http://www.ncbi.nlm.nih.gov/pmc/articles/PMC186661/ # Genes #Predictions #Genome #Tools #Gaze

    2865 days ago

  • Hardeep Kaur

    Genome and coverage https://rtsf.natsci.msu.edu/_rtsf/assets/File/depth%20and%20coverage.pdf #Coverage #Genome #Depth #Reads #NGS

    2781 days ago

  • Jitendra Narayan

    Comparative genomics resources https://www.dcode.org/ #Genomics #Resources #DCODE #Genome #Compare

    2862 days ago

  • Jit

    Plot genomoc data https://cran.r-project.org/web/packages/circlize/vignettes/genomic_plot.pdf #Circlize #R #Genome #Plot

    2862 days ago

  • Radha Agarkar

    Extract fasta sequence by Ids: perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file #Perl #PerlOneliner #PerlTrick #Extract #Ids #Fasta

    2847 days ago

  • Radha Agarkar

    Extract sequence by using Ids file (assuming one ids in a line): perl -ne 'if(/^>(\S+)/){$c=$i{$1}}$c?print:chomp;$i{$_}=1 if @ARGV' ids.file fasta.file #PerlTricks #PerlOneliner #Perl #Extract #Ids #

    2847 days ago

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