2678 days ago
2678 days ago
Comment on "SGA: String Graph Assembler"
Try this hierarchical genome assembly (HGA) assembler https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4779561/2749 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2772 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2777 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
A comparative analysis of the genomes of Drosophila melanogaster, Caenorhabditis elegans, and Saccharomyces cerev...e only twice that of yeast, but different gene families are expanded in each genome, and t...2777 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
Korean researchers have sequenced and have begun analyzing the genome of the Far Eastern Amur leopard, Panthera pardus orientalis, an...of leopard found in southern Russia and northern China. https://www.genomeweb.com...2777 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
Chromosomer – a reference-based genome arrangement tool, which rapidly builds chromosomes from genome contigs or scaffolds using their alignments to a reference genome of a closely related species....ent common operations accompanying the genome assemb...2815 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
A field guide to whole-genome sequencing, assembly and annotation http://onlinelibrary.wiley.com/doi/10.1111/eva.12178/full2919 days ago
Comment on "Software packages for next gen sequence analysis"
MaGuS: a tool for quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data MaGuS (Map-GUide...or of assembly quality. It uses a draft genome assembly, a genome map, and h...dopsis genome with Illumina reads and a Whole-Genome Profil...2952 days ago