De novo genome assembly: what every biologist should know http://www.nature.com/nmeth/journal/v9/n4/full/nmeth.1935.html #NGS #Assembly #Genome #Sequencing #DeNovo
An Opinionated History of Genome Assembly Algorithms http://www.homolog.us/blogs/blog/2014/02/21/opinionated-history-genome-assembly-algorithms/ #NGS #Assembly #History
Alignathon: A collaborative competition to assess the state of the art in whole genomesequence alignment. http://compbio.soe.ucsc.edu/alignathon/index.html #Alignment #Simulation #Evolver
AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references http://bioinformatics.oxfordjournals.org/content/30/12/i319.full #AlignGraph #Alignment #Algo #Referen
Genomic signature: characterization and classification of species assessed by chaos game representation of sequences. http://www.ncbi.nlm.nih.gov/pubmed/10563018/ #ChaosGame #Genome #Signature
Transposable elements and genome evolution https://science.nichd.nih.gov/confluence/download/attachments/72451496/2012_Fedoroff+review.pdf #Evolution #TEs
