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Results for "Sequence analysis."

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• • Manisha Mishra@manisha

  

  Remove the sequence by fasta ids. awk 'BEGIN{while((getline<"ids.txt")>0)l[">"$1]=1}/^>/{f=!l[$1]}f' seq.fa #Remove #Delete #ids #fasta

  2237 days ago

• • Jit@jit.aber

  

  Genome Assembly: #Scaffolding Guided by Related Genomes https://www.duo.uio.no/bitstream/handle/10852/37431/Furenes_Master.pdf?sequence=1

  2174 days ago

• • Jit@jit.aber

  

  http://qb.cshl.edu/assemblytics/ #Analysis #Genome #Mummer #Assembly #Assemblytics

  2150 days ago

• • Rahul Nayak@rahul

  

  Useful #tools for #genome analysis https://gigascience.biomedcentral.com/articles/10.1186/s13742-015-0077-2

  2149 days ago

• • Neelam Jha@neelam

  

  Reverse complement of fasta sequence $ tr -d "\n " < chrII.fa | tr "[ATGCatgcNn]" "[TACGtacgNn]" | rev > chrII_reverseHai.fa #Reverse #Complement #DNA

  2070 days ago

• • Shruti Paniwala@shruti

  

  Variant calling https://www.ebi.ac.uk/training/online/course/human-genetic-variation-i-introduction/variant-identification-and-analysis/what-variant #variant #snp #tutorial

  2046 days ago

• • Rahul Nayak@rahul

  

  #Search a #genome sequence for secondary #metabolite biosynthetic gene clusters https://antismash.secondarymetabolites.org/#!/start

  1997 days ago

• • Jit@jit.aber

  

  Extract sequence by ids $ xargs samtools faidx Adineta_vaga.v2.pep.fa < AlienIds > allAlienSeq.fa #Extract #Ids #Sequences

  1992 days ago

• • Jit@jit.aber

  

  Mesquite: A modular system for evolutionary analysis http://www.mesquiteproject.org/ #Evolution #Framework

  1978 days ago

• • Jit@jit.aber

  

  Recommendations for the description of #sequence #variants https://www.hgvs.org/mutnomen/recs.html

  1968 days ago

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