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How to install Perl modules manually, using CPAN command, and other quick ways
...r you need to install several perl modules and dependencies. Installing Perl modules manually by resolving...er Perl modules using CPAN. I know you are laughing, "to i...nbsp; 00:00(3/5): perl-CPAN-1.9205-31.fc9.i386.rpm&n...quick and best way to install Perl modules, Bioperl. Following a...3977 days ago
Five unique traits of effective computational biologist
...ve an open mind to sources of knowledge that others may shut out...d biological programmer learn Perl's regular expression when the...rammer also read about the BioPerl packages, genomics, DNA strin...omputational biologist, don't know what they are doing biologica...3977 days ago
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Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly regu...3979 days ago
Detect the sequence pattern and its location in fasta file with match and mismatches information.
This script is one of my old script to detect some centromeric pattern in chromosomes. User can also control the number of mismatches allowed through command line .. To run: perl centro.pl3894 days ago
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Bioinformatics Courses Around the World
...ilarly, bioinformatics may also be known by other names such as: comp...ee-day course, TBA mining the knowledge of the new genomes, two-...sp; (Ames, Iowa) Perl Programing Course for Bioinfo...t there in the list, please let me know info_at_bioinformaticsonline....3970 days ago
Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked subjects. Thi...urces-to-learn-java-programming-article Perl Tutorials www.devdaily.com/perl/ www.pageresource.com/cgirec...or Biologists (Weizmann Institute) www.webknowhow.net/dir/Perl/Tutorials/ P...3157 days ago
Bioinformatics: Introduction to PERL
This course is aimed at those new to progra...s an introduction to programming using Perl. By the end of this course, a...tendees should be able to write simple Perl programs and to understand mo...ll be taught using the online Learning Perl materials created by Sofia Ro...3978 days ago
Perl Maven tutorial by Gabor Szabo
I personally reccoment this tutorial for Perl users. More detail http://perlmaven.com/3949 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 lab...degree (PhD) in bioinformatics with strong expertise in script writing (Python/Perl) and pipeline development....3975 days ago
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Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunatel...dowed by that of the reigning Perl Poet, Sharon Hopkins. She has written quite a few Perl poems, as well as a paper on...and the Guardian: #!/usr/bin/perl APPEAL: listen (please, ple...length(of-days) # listen (a perl poem)# Sharon Hopkins# rev. J...3945 days ago
Bioinformatician special skills !!
Bioinformatician and Computational biologist are the only programmers on Earth who c...)$/; /"(?:[^"\\]++|\\.)*+"/; /^[+-]?\ *(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?$/; perl -ne 'BEGIN{$/=">"}if(/^s*(...3922 days ago
Bioinformatics 101 - Running BLAST
How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David...3923 days ago
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Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the...nd compare the performance of Perl code. Here is a quick guide...ses the functionality of your Perl module. This program should t...mpare the performance of your Perl module to other modules or to...442 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If using conda conda create --name perlENV perlconda activate perlENV conda install -c bioconda perl-bundle-bioperl conda install -c bioconda perl-bioperl442 days ago