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Results for "NGS analysis"

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• • Rahul Agarwal@raag

  

  VISTA is a comprehensive suite of programs and databases for comparative analysis of genomic sequences !http://genome.lbl.gov/vista/index.shtml #Genomics #Seq

  3567 days ago

• • Neel@neelam

  

  Awesome Machine Learning https://github.com/josephmisiti/awesome-machine-learning#perl-data-analysis--data-visualization #AI #Machine #Learn #Teach #Repo

  1190 days ago

• • John Parker@parker

  

  NGS analysis pipeline http://www.egr.msu.edu/changroup/Protocols/NGS%20analysis%20example%20of%20a%20pipeline.html #Pipeline #NGS #Genomics #Tutorial

  3670 days ago

• • Radha Agarkar@radhaagarkar

  

  Webinar http://webinars.sciencemag.org/webinar/archive/importance-bioinformatics-ngs #NGS #Webinar

  3697 days ago

• • Jit@jit.aber

  

  Extract list of read ID from bam file: samtools view mbi.sorted.bam |perl -ne '/ID/ && print' > extractedID.sam #Extract #Ids #SAM #BAM #NGS

  3684 days ago

• • Jit@jit.aber

  

  FastaQ 2 Fasta Oneliner: paste - - - -< totalRNA_placental_1.fastq | perl -pale'$_="@F[0..1]"'|tr "\^@" "\>" | perl -pale 's/\s/\n/g' #Oneliner #NGS #FastaQ #Fasta

  3684 days ago

• • Jitendra Narayan@admin

  

  Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. https://github.com/lh3/seqtk #FASTA #FASTAQ #NGS

  3677 days ago

• • John Parker@parker

  

  Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

  3676 days ago

• • santosh pal@santoshpal

  

  Load the ShortRead and BiocParallel packages for NGS data analysis in R #bioconductor #R #qualitycheck

  3675 days ago

• • Jitendra Narayan@admin

  

  R getting strong for NGS analysis http://manuals.bioinformatics.ucr.edu/home/ht-seq #Packages #NGS #R #Bioconductor #Bowtie #Sequence #Analysis #SNP

  3674 days ago

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