Comment on "Run miniasm assembler on nanopore reads !"
I followed this to assemble the genome using ONT (nanopore reads) Minimap and miniasm are ultrafast tools for (i) mapping and (ii) assembly. Designed for long, noisy rea...2225 days ago
Comment on "Various scholarships around the world !!"
Internship Programme UNESCO You can apply for an internship if you fall under any of the following: Student currently enrolled in a bachelor or postgraduate degree...2776 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper reviewed "An applications-focused review of comparative genomics tools: Capabilities, limitations and future challenges" http://bib.oxfordjournals.org/content/4/2/105.full.pdf2783 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
A field guide to whole-genome sequencing, assembly and annotation http://onlinelibrary.wiley.com/doi/10.1111/eva.12178/full2925 days ago
Comment on "Visual machine learning !!!"
Useful paper on Machine learning in bioinformatics https://bib.oxfordjournals.org/content/7/1/86.fullMachine learning in bioinformatics3043 days ago
Comment on "List of popular bioinformatics software/tools"
PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, s...3086 days ago
3086 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
A field guide to whole-genome sequencing, assembly and annotation http://onlinelibrary.wiley.com/doi/10.1111/eva.12178/full3292 days ago
Comment on "Does anyone have Nanopore latest updates?"
Researchers in Canada and the U.K. have for the first time sequenced and assembled de novo the full genome of a living organism, the bacteria Escherichia Coli, using Oxfo...3296 days ago
Comment on "Does anyone have Nanopore latest updates?"
Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION http://biorxiv.org/content/early/2015/05/20/019281.full-text.pdf+html Additional tools for analyzing Oxford Nanopore minION data by John Urban https://github.com/JohnUrban/poreminion3321 days ago