2668 days ago
2669 days ago
Comment on "SGA: String Graph Assembler"
Try this hierarchical genome assembly (HGA) assembler https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4779561/2739 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2762 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2767 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
A comparative analysis of the genomes of Drosophila melanogaster, Caenorhabditis elegans, and Saccharomyces...y twice that of yeast, but different gene families are expanded in each genome, and the multidomain proteins...2767 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
Korean researchers have sequenced and have begun analyzing the genome of the Far Eastern Amur leopard, Panthera pardus oriental...pard found in southern Russia and northern China. https://www.genomeweb.com/sequencing/amur-leopar...2767 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
Chromosomer – a reference-based genome arrangement tool, which rapidly builds chromosomes from genome contigs or scaffolds using their alignments to a reference genome of a closely related species....common operations accompanying the genome assembly process. More at&nb...2805 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
A field guide to whole-genome sequencing, assembly and annotation http://onlinelibrary.wiley.com/doi/10.1111/eva.12178/full2909 days ago
Comment on "Software packages for next gen sequence analysis"
...or quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data MaGuS...tor of assembly quality. It uses a draft genome assembly, a genome map, and h...idopsis genome with Illumina reads and a Whole-Genome Profiling (WGP) map. https:/...2942 days ago