Results for "HTS"

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  • Picard

    ...a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especia...

    3108 days ago

  • vcfR

    Most variant calling pipelines result in files containing large quantities of variant information. The variant call format (vcf) is an increasingly popular...

    2996 days ago

  • +6 more Bookmarks

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  • Genome assembly tutorial http://marinetics.org/teaching/hts/Assembly.html #assembly #Tutorial #MIRA #IonTorrent

    2771 days ago

Bio-Scripts

  • Install HTSLIB on Ubuntu !

    ...t https://github.com/samtools/htslib/releases/download/1.9/htslib-1.9.tar.bz2 --2018-10-25...tslib-1.9/cram/cram_encode.c htslib-1.9/cram/cram_encode.h ht...tslib-1.9/test/bgziptest.txt htslib-1.9/test/bgziptest.txt.gz....o hfile_net.c echo '#define HTS_VERSION "1.9"' > version.h g...

    2199 days ago

  • Installing Platypus on Ubuntu !

    ...libc-bin (2.27-3ubuntu1) ... ➜ htslib-1.9 git:(master) ✗ make in...le_net.o hfile_net.c echo '#define HTS_VERSION "1.9"' > version.h g...alloc.c gcc -shared -Wl,-soname,libhts.so.2 -o libhts.so kfunc.pico...------------|----------------- htslib-1.9 |...

    2199 days ago

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