Tags: Bioinformatics, Chromosome, Genome, NGS, Align, Compare, Similarity, Scaffolding
2750 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short reads is usually highly memory-intensive, only a few assemblers, best suited for your assembly. For the sake of computational me...Tags: Bioinformatics, Genome, NGS, Assembly, Tools, Visualization
2742 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, De Bruijn graph
2749 days ago
Tags: Bioinformatics, Analysis, NGS, Genome, Synteny, Homology, MCscan
2747 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short reads is usually highly memory-intensive, only a few assemblers, best suited for your assembly. For the sake of computational me...Tags: Bioinformatics, Genome, Assembly, RNA, DNA, Sequence, NGS
2742 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, MetaBAT, MetaGenomics, Contamination
2673 days ago
Tags: Bioinformatics, Analysis, Progressive Cactus, Genome
2721 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for comparative analyses of genomic variation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from insertions, deletions or from rearrangement events. Computational to...Tags: Bioinformatics, Plot, Synteny, Genome, Viewer, Comparative genomics
2720 days ago
Tags: Bioinformatics, Assembly, PANDASEQ, Genome, NGS, Illumina
2715 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, Harvest, Alignment, Tools
2707 days ago