Comment on "Keep Your Important SSH Session Running when You Disconnect from Server !!!"
To block a node srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash.sh169 days ago
Comment on "LoReTTA, a user-friendly tool for assembling viral genomes from PacBio sequence data"
Detail paper here https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8111061/199 days ago
Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of its execution time and memory usage. T...ction(); } Run the benchmark: Call the timethese func...chmark using the timethese function from the Benchmark module...649 days ago
Comment on "A quick guide to Phred scaling"
...probability of an error in each base call in a sequencing re...from 0 to 60. The higher the score, the more confident we are...increase of 10 in the Phred score corresponds to a 10-fold d...score is represented as an ASCII character, with the charact...649 days ago
Comment on "Short-read assembly using Spades !"
...Short-read assembly is the process of constructing a genome sequence...ly using SPAdes: Quality control of raw reads: Before ru...rious tools such as Trimmomatic or FastQC. Running SPAde...of the assembled genome. This can be done using tools such as...649 days ago
649 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If using conda conda create --name perlENV perlconda activate perlENV conda install -c bioconda perl-bundle-bioperl conda install -c bioconda perl-bioperl649 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Installing in CONDA env You can check using which perl - it should give you the perl that's located within your conda environment....onda-directory. When you install packages via cpan it will also pr...d 'perl-' to the beginning. In your case, conda install -c biocond...649 days ago
Comment on "Calculate the significance of the difference between two trends"
Useful reading material https://statsandr.com/blog/anova-in-r/651 days ago
Comment on "Short-read assembly using Spades !"
...l for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio, and Oxford Nanopore seque...: Install SPAdes: SPAdes can be downloaded from the offi...will be saved in a file named contigs.fasta. You can view the...654 days ago
