Results for "novel"

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  • NovelSeq: Novel Sequence Insertion Detection

    The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/20385726

    Tags: NovelSeq, Novel, Sequence, Insertion, Detection

    2565 days ago

  • CoronaVIR: Computational Resources on Novel Coronavirus (SARS-CoV-2 or COVID-19)

    Aim of this web site is to facilitate the scientific community to fight against severe pandemic disease COVID-19 caused by SARS-CoV-2. Here, We have collected and organized information related to novel strain of coronavirus, i.e. SARS-CoV-2.and its resulting disease COVID-19 from the literature...

    Tags: CoronaVIR, Computational, Resources, Novel, Coronavirus, SARS-CoV-2, COVID-19

    1147 days ago

  • EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

    SWGIS v2.0 along with the EuGI database, which houses GIs identified in 66 different eukaryotic species, and the EuGI web-resource, provide the first comprehensive resource for studying HGT in eukaryotes. https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-4724-8

    Tags: EuGI, novel, genomic, islands, facilitate, horizontal, gene, transfer, detection, eukaryotes, tools

    2228 days ago

  • GMASS: a novel measure for genomeassembly structural similarity

    The GMASS score is a novel measure for representing structural similarity between two assemblies. It will contribute to the understanding of assembly output and developing de novo assemblers. https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2710-z

    Tags: GMASS, novel, measure, genome, assembly, structural, similarity

    1890 days ago

  • mixtureS: a novel tool for bacterial strain reconstruction from reads

    mixtureS that can de novo identify bacterial strains from shotgun reads of a clonal or metagenomic sample, without prior knowledge about the strains and their variations. Tested on 243 simulated datasets and 195 experimental datasets, mixtureS reliably identified the strains, their numbers and ...

    Tags: mixtureS, novel, tool, bacterial, strain, reconstruction, reads

    1396 days ago