Comment on "Computational Proteomics : Lets remember the basics"
Interactive Periodic Table of the Elements, in Pictures and Words This periodic table is easy to remember https://elements.wlonk.com/ElementsTable.htm1669 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Tools publication at BMC Research Notes1757 days ago
Comment on "Patterns: a modeling tool dedicated to biological network modeling"
https://github.com/fbertran/Patterns1787 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Bioinformatics jobs at https://dossier.interfolio.com/deliveries/search/results1875 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...oinformatics Journals (the most recent Impact Factor :: 5-year Impac...Biology (1.059 :: 1.467) Current Bioinformatics (0.921 ::...in Medicine (0.766 :: 0.756) International Journal of Data Min...t Methods (3.102 :: 3.651) Plant Physiology (6.841 :: 8.0...1887 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Thanks for such a useful list. I found this website https://www.science.hr/jobs/?q=bioinformatics also useful for job hunt.1895 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
NAR: Genomics and Bioinformatics publishes high quality research into genomics and bioinformatics, including novel computational or experimental methods and novel biological findings related to genomics, proteomics, transcriptomics, and epigenetics. https://academic.oup.com/nargab1903 days ago
Comment on "Estimate Genome Size"
# count k-mers (see jellyfish documentation for options) gzip -dc reads1....gz reads2.fastq.gz | jellyfish count -m 31 -o fastq.counts -C -s 1...istogram jellyfish histo fastq.counts_0 > fastq.counts_0.histo...use find_valleys.pl to help pinpoint the actual peak find_valleys...1942 days ago
1947 days ago
Comment on "Extract fasta sequence from a multifasta file with fasta header Ids"
...'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file If you have a large number of sequences that you want to extract, then you most lik...ate file. Assuming that you have one sequence identifier per line in the file ids...1954 days ago