Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny program makes it possible to speed up the computations by over two times in comparison with SatsumaSynteny2, another popular tool. Such high efficiency was attained by im...1557 days ago
Comment on "AutoDock Vina: an open-source program for doing molecular docking."
AutoDockFR (or ADFR in short) is a protein-ligand docking program developed in the Sanner laboratory at Scripps Research under the AutoDock umbrella. https://ccsb.scripps.edu/adfr/1568 days ago
Comment on "AutoDock Vina: an open-source program for doing molecular docking."
QVina-W, a new docking tool particularly useful for wide search space, especially for blind docking. QVina-W utilizes the powerful scoring function of AutoDock Vina, the accelerated search of QVina 2, and adds thorough search for wide search space. https://qvina.github.io/1568 days ago
Comment on "Coronavirus Resources !"
Gene and protein expression data of human genes implicated in the virus infection of the host cells. Identifying cell types and genes with highest expression in SARS-CoV-2 infections. https://www.covid19dataportal.org/expression?db=expression1570 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Journal of Theoretical Biology also accept computational papers https://www.journals.elsevier.com/journal-of-theoretical-biology1581 days ago
Comment on "Installing Bio::SCF perl module"
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo cpan -T install Bio::SCP[sudo] password for jit: Loading internal null logger. Install Log::Log4perl for logging messagesReading '/home/jit/.cpan/Metadata' Database was generated on Fri, 13 Mar 2020 03:55:17 GMTinstall is up to date (0.01).1588 days ago
Comment on "Setting up autoConTAMPR !"
...le (1:3.8.31-1) ...Setting up perl-doc (5.18.2-2ubuntu1.7) ...Setting up perl-tk (1:804.031-1build1) ...S...sty/universe libuniversal-can-perl all 1.20140124-1 [11.8 kB]G...u/ trusty/universe libbio-scf-perl amd64 1.03-1build4 [23.3 kB....gzFetching with LWP:http://espejito.fder.edu.uy/cpan/authors/...1588 days ago
Comment on "Coronavirus Resources !"
SARS-CoV-2 SNP Calling pipeline https://github.com/DamienFr/CoV-homoplasy1605 days ago
Comment on "Installing Bio::SCF perl module"
In Ubuntu, you can try the following command to install perl packages: sudo apt-get install libbio-scf-perlsudo apt-get install -y bioperlsudo apt-get install -y libstatistics-distributions-perlsudo apt-get install -y libterm-progressbar-simple-perl1657 days ago
Comment on "Installing Bio::SCF perl module"
The module is updated https://launchpad.net/ubuntu/+source/libbio-scf-perl You can install it in Ubuntu as follows: sudo apt-get install libbio-scf-perl Dont forgot to install all deps first.1657 days ago