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• • Gudiya Pal@gudiya

  

  Comment on "Tools to detect synteny blocks regions among multiple genomes"

  Thanks for such a useful list of synteny identification tools. If anyone interested to analyze synteny at the protein level, they can try this tool https://github.com/thiesgehrmann/proteny

  3164 days ago

• • Jit@jit.aber

  

  Comment on "Visual machine learning !!!"

  Useful paper on Machine learning in bioinformatics https://bib.oxfordjournals.org/content/7/1/86.fullMachine learning in bioinformatics

  3173 days ago

• • Rahul Nayak@rahul

  

  Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"

  EvoDir job page http://life.mcmaster.ca/cgi-bin/my_wrap/brian/evoldir/Jobs/

  3178 days ago

• • Jit@jit.aber

  

  Comment on "List of popular bioinformatics software/tools"

  MEDIPS: genome-wide dierential coverage analysis of sequencing MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments https://www.bioconductor.org/packages/3.3/bioc/vignettes/MEDIPS/inst/doc/MEDIPS.pdf

  3178 days ago

• • Jit@jit.aber

  

  Comment on "BioProgramming"

  tacg – a grep for DNA http://www.ncbi.nlm.nih.gov/pmc/articles/PMC99049/

  3179 days ago

• • Jit@jit.aber

  

  Comment on "Tools to detect synteny blocks regions among multiple genomes"

  Orthology Detection Combining Clustering and Synteny for Very Large Datasets http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0105015

  3179 days ago

• • Rahul Nayak@rahul

  

  Comment on "liftover"

  This tool converts genome coordinates and genome annotation files between assemblies.  The input data can be pasted into the text box...d from a file.  If a pair of assemblies cannot be selected from the pul...

  3189 days ago

• • Rahul Nayak@rahul

  

  Comment on "List of popular bioinformatics software/tools"

  Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR) http://bix.ucsd.edu/projects/blasr/

  3190 days ago

• • Jitendra Narayan@admin

  

  Comment on "Recombination detection tool"

  Using population genomic data http://arxiv.org/ftp/arxiv/papers/1403/1403.4264.pdf to detect recombination hotspot.

  3194 days ago

• • Rahul Nayak@rahul

  

  Comment on "Recombination detection tool"

  Intersting bookmark Jit, you can also try Recombination Detection Program (RDP) http://web.cbio.uct.ac.za/~darren/rdp.html

  3195 days ago

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