Comment on "Most Commonly used Awk by Bioinformatician"
I love awk but recommend you to try bioawk . Bioawk is a modified version of awk which will parse some common sequence formats. https://github.com/lh3/bioawk3862 days ago
Comment on "Encode sequencing data freely available to download and use for academic means"
The annotation file is available at http://www.nimblegen.com/downloads/annotation/hg19/3862 days ago
Comment on "List of popular bioinformatics software/tools"
Qlucore Omics Explorer is a next-generation bioinformatics software program that delivers immediate results. Combine visualization with powerful statistical methods in the easy to use program to obtain new results faster. http://www.qlucore.com/3862 days ago
Comment on "List of popular bioinformatics software/tools"
EpiExplorer is a web tool that allows you to use large reference epigenome datasets for your own analysis without complex scripting or laborous preprocessing. http://epiexplorer.mpi-inf.mpg.de/3862 days ago
Comment on "Encode sequencing data freely available to download and use for academic means"
User can also find some useful ENCODE data at http://www.gencodegenes.org/releases/17.html3862 days ago
Comment on "R and Bioconductor Tutorial"
Little Book of R for Bioinformatics by Avril Coghlan, Wellcome Trust Sanger Institute, Cambridge, U.K. http://a-little-book-of-r-for-bioinformatics.readthedocs.org/en/latest/3863 days ago
Comment on "R and Bioconductor Tutorial"
Sean Davis tutorial is really useful http://watson.nci.nih.gov/~sdavis/tutorials/3863 days ago
Comment on "R and Bioconductor Tutorial"
Resources to help you learn and use R http://www.ats.ucla.edu/stat/r/3863 days ago
Comment on "R and Bioconductor Tutorial"
Yet another useful R tutorial at http://www.nceas.ucsb.edu/files/scicomp/Dloads/RProgramming/BestFirstRTutorial.pdf3863 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
http://omictools.com/ an useful tools for omics data analysis ...3866 days ago