2081 days ago
Comment on "HALC: High throughput algorithm for long read error correction"
...ary mode; obtained with cat left_reads.fa >short_reads.fa and then cat right_reads.fa >>short_reads.fa). Using AlignGraph runHALC.py long_reads.fa co...2133 days ago
2141 days ago
Comment on "Installing Porechop on Ubuntu !"
...7 reads loaded Looking for known adapter sets10,000 / 10,000 (100.0...Set %ID %ID SQK-NSK007 96.6 81.8 Rapid 66.1 0.0 SQK-MAP006 80.0 82...96 (forward) 79.2 76.0 Trimming adapters from read ends SQK-NSK007...reads were split based on middle adapters Outputting trimmed reads...2148 days ago
Comment on "Various scholarships around the world !!"
... serves as a stepping stone for our research fellows to be appointed as independent princip...s currently participating in the IBS research centers are NOT eligible to apply. https://www....2161 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...f SV. [10000] -v --ovlp-rat [FLOAT] Minimum overlapping ratio to cluster two skel...] Length of BWT-seed. [19] -f --fastest Use GEM-mapper's fastest mode(--fast-mapp...rds for a specific split read region. [10] -g --gap-split [INT] Minimum length of...2164 days ago
2164 days ago
Comment on "Installing Perl environment on Linux"
You migth need to install this sudo conda install -c bioconda perl-app-cpanminus2168 days ago
Comment on "Installing Perl environment on Linux"
....0 | 10 11.2 MB bioconda perl-app-cpanminus-1.7039 | 2 220 KB...################# | 100% perl-app-cpanminus-1 | 220 KB | #####...ndencies: Data::Stag, URI::Escape, IO::String, Test::Most-->...OK==> Found dependencies: Capture::Tiny, Text::Diff--> W...2168 days ago
Comment on "Installing Perl environment on Linux"
curl -L http://cpanmin.us | perl - --sudo App::cpanminus The above is installing the "zero configuration CPAN modules installer" called cpanm. (Can take several minutes to install - don't break the process) and after - simply: cpanm Foo cpanm Module::One cpanm Another::Module2168 days ago