Genome Assembly Tools and Software - PART1 !!
...ration sequencers. ARC 1.1.4-beta – Assembly by...AP-Assembler can scales up to 1024 cores when processing Fish...events. SAT-Assembler 20160120 – Scalable and Acc...of gap formation. BUSCO v1.1b1 – Assessing Genome...2680 days ago
Source Code and Pseudo Code !!
...and not just cite an abstraction. Examples: 1. If student's grade is great...-be-ascending-flag to 0 set consec cntr to 1 set ascending cntr to 1...f (Sorry message and skip a line) add 1 to sorry total endif e...2653 days ago
Perl Special Vars Quick Reference
...nd Separators $. Current line number (or record number) of most recent filehandle. $/ Input record separator. $| Output autoflush. 1=autoflush, 0=default. Applies...2638 days ago
Awesome perl frameworks, libraries and software - PART 1
...perl-live - Core BioPerl 1.x code tadzik/rakudobrew&nbs...ith Host Checker enabled perl11/cperl - a perl5 with cl...parse Amazon's reviews sjdy521/pfqq - 【该项目已停止维护,请关注重构项目...using a proxy and using API v1 should you so choose. sass/p...2483 days ago
2483 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...bly De novo genome assembly MHAP Produces highly continuous assembly (fully resolved chromosome arms) from third-generation long and noisy reads (10 kbp) using a dimensionality...2365 days ago
2345 days ago
Single Cell RNAseq data analysis tutorial !!
...RNA-Seq data http://biorxiv.org/content/early/2016/09/02/036558 Citrus: A tool...ing analysis http://biorxiv.org/content/early/2016/09/14/045070 Single-Cell Re...sing SPADE http://www.nature.com/nprot/journal/v11/n7/full/nprot.2016.066.html...2345 days ago
2345 days ago
Edit distance application in bioinformatics !
...CSS_Sorted ); my $lcss_ary_ref = LCSS( \@SEQ1, \@SEQ2 ); # ref to array my $lcss_string = LCSS( $STR1, $STR2 ); # string my...value between 0 (meaning entirely different) and 1 (meaning identical). Apparent...2335 days ago