Results for "454 data"
Top-level pages
Since few years miRNA has shown to play important role i...DBs and tools related with miRNA: miRNA Sequencing data analysis : http://tools...._prediction.html Idea of analysing miRNA Sequencing data : http://www.illumina.com/ap...3509 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is...nteractions, COSMIC mutations, and CNV data for cell lines. Does not require a network connection for local databases. View and search PubMed...Med, Genomic Variations and many other databases to retrieve up-to-date a...3554 days ago
- Pathway Analysis is usually performed with...nomics, transcriptomics and proteomics data, interactions between genes i...mation in one of the pathway knowledge databases (KEGG,Reactome,Panther,B...ic/Pathways_2014_Module2.pdf Impotant Database and Tools: GeneMANIA, Cy...
3509 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to...mated script to perform again and again on different data Disadvantages Lack...aration (Optional) Download and save the tutorial data set from http://bioinforma...3374 days ago
Software packages for next gen sequence analysis
.... Supports Illumina and SOLiD data. De novo Align/Assemble * AB...using reads gathered through 454 sequencing technology (GS20 or GS FLX). Compatible with 454, Solexa and Sanger data. Linux...nding sites based on ChIP-Seq data. (C++) * SISSRs - Site Identi...3255 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways i...e one leading method in -omics data analysis and visualization....ework targeted at biomolecular data. Visualization of interdepend...nbsp; Visualizing multi-omics data in metabolic networks https:...ironment composed of a central database and a visual editor, buil...2300 days ago
- Reformat is a member of the BBMap/BBTools package. It is...ol designed for converting reads or other nucleotide data between different formats. It...terleaved files It is multithreaded and can process data at over 500 megabytes per sec...
2727 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...on Torrent, Pac Bio and Roche 454) and project types Available...BED, Agilent files, NimbleGen data summary files, VCF files, Imp...sequencing platforms- SOLiD, 454 Life Sciences, Genome Analyzer...om high-throughput sequencing datasets; calls variants found in...2922 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9...on.txt) Note: You can download GTF files from http://www.ensembl.org/info/data/ftp/index.html
2119 days ago
- alignment: the mapping of a raw se...pressed format for storing SAM data. BCF Format: Binary call for...pressed format for storing VCF data. CIGAR String: Compact Idios...ormat for storing raw sequence data. For example, the FASTA file...odes multiple elements of meta-data regarding a read and its alig...
2882 days ago
