Results for "454 data"
Top-level pages
Genome Assembly Tools and Software - PART1 !!
...ory saving and convenience of data inquiry, high-throughput short reads data is always initially formatte...reads and long reads (Sanger, 454). KmerGenie 1.6982 &ndash...for typical shorter reads by 454 sequencing. Phusion 2.1c...me high-throughput sequencing datasets. SPAdes 3.6.2 &ndash...2698 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in ter..." endif 5. Larger example: NOTE: NEVER ANY DATA DECLARATIONS IN PSEUDOCODE...discussed ahead) in your pseudocode. Do not include data declarations in your pseudoco...2672 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both...herefore the fragment size distribution can be learned empirically for each WGS data set separately.concordant rea...2535 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl fr...nbsp;- Perl binding for Redis database pplu/aws-sdk-perl -...open source repository garu/Data-Printer - colored pretty...ver for the MySQL and MariaDB databases beide/Bootimg-scripts&n...plication that serves KeePass database entries on a web frontend...2502 days ago
- It is often necessary to import sample textbook data into R before you start worki...k = loadWorkbook("mydata.xls") > df ...ocumentation > mydata = read.spss("myfile...code samples above assume the data files are located in the R&nb...
2502 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two...g of coding sequences, for discovery of new genes and (by reference to sequence data banks) for discovery of ident...2475 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abunda...ference sequences and RNA-seq data (k-mer based) Software (C++)...of transcripts using RNA-seq data (uses k-mers) https://c...aplogroup classifier from NGS data (k-mer based) Software (Pyth...from unassembled raw sequence data from whole genome sequencing...2384 days ago
- When you have both Illumina and Nanopore data, then SPAdes remains a good o...quired for metagenomic sample data --rna this...bling Advanced options: --dataset <filename>...ead 1 and read 2 of the MiSeq data the nanopore data put the o...
2364 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarra...the useful links: Single Cell RNAseq data analysis Tutorial A step-by-...-level analysis of single-cell RNA-seq data A step-by-step workflow for...models applied to single-cell RNA-seq data separate biological drivers f...2363 days ago
- RNA-sequencing (RNA-seq) has a wide variet...view all of the major steps in RNA-seq data analysis, including experimen...A survey of best practices for RNA-seq data analysis RNA-seq workflow: g...EBI RNA-Seq exercise An open RNA-Seq data analysis pipeline tutorial wi...
2363 days ago
