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Results for "ALLHiC"

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• • BioStar@biostar

  

  ALLHiC: Phasing and scaffolding polyploid genomes based on Hi-C data

  ...gram links the allelic haplotypes together. To solve the problem, we developed a new Hi-C scaffolding pipeline, called ALLHIC, specifically tailored to the polyploid genomes. ALLHIC pipeline contains a total of...

  1973 days ago

Wire posts

• • Jit@jit.aber

  

  Export the PATH in Linux $ PATH="/home/urbe/Tools/ALLHiC/scripts:${PATH}" and then $ export PATH #Path #Set #Variable

  1973 days ago

• • Rahul Nayak@rahul

  

  ALLHiC: identify allelic contigs https://github.com/tangerzhang/ALLHiC/wiki/ALLHiC:-identify-allelic-contigs #AllHic #Scaffolding #3C #ALLHiC

  1910 days ago

Tags

• • BioStar@biostar

  

  ALLHiC: Phasing and scaffolding polyploid genomes based on Hi-C data

  The major problem of scaffolding polyploid genome is that Hi-C signals are frequently detected between allelic haplotypes and any existing stat of art Hi-C scaffolding program links the allelic haplotypes together. To solve the problem, we developed a new Hi-C scaffolding pipeline, called ALLHIC,...

  Tags: ALLHiC, Phasing, scaffolding, polyploid, genomes, Hi-C, data, assembly

  1973 days ago

• • Rahul Nayak@rahul

  

  ALLHiC: identify allelic contigs https://github.com/tangerzhang/ALLHiC/wiki/ALLHiC:-identify-allelic-contigs #AllHic #Scaffolding #3C #ALLHiC

  Tags: AllHic, Scaffolding, 3C, ALLHiC

  1910 days ago