List of bioinformatics open source projects/software.
...g and visualization designed for rapid prototyping Bio4j http://b...a project that applies Continuous Integration tools and techniques.... It uses Jenkins and its plug-in API to create biology workflows and manag...rg/ Scientific workflow and data integration system GenePattern http://w...3767 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CAS...ata in a single search. Currently it is the only tool that offers this kind of integration at this speed. PDBeMotif can...3755 days ago
Comprehensive list of visualization tools for biological pathways
...http://www.genmapp.org/ Ingenuity IPA Data integration platform and manually...way browser using KEGG atlas and Google Maps API http://www.g-language.org/PathwayPro...r, built around an extensive ontology and an integration framework http://www.cs.bilk...2298 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...upon python, samtoools, pysam API, BLAT, SnpEff Input: BAM Re...finds somatic mutations using integration of DNA and RNA seq da...rence Repository; “data integration tool that enables coordinate...site 2014) Web app program; Rapid evaluation of disease causing altera...2919 days ago
Genome Assembly Tools and Software - PART1 !!
...Specifically it facilitates rapid detection of inconsistencies...me assembler viewer with data integration capability. EagleView...MAIA (Multiple Assembly IntegrAtion) is an algorithm to integrate...ch as snake venom glands, or rapidly evolving viral populations, such a...2696 days ago
Awesome perl frameworks, libraries and software - PART 1
...eb-scraper - Perl web scraping toolkit semifor/Net-Twitte...icacies of the Facebook Graph API. lhost/sendxmpp - perl-...de - EPIC - Eclipse Perl Integration (new official reposit... - The Ensembl Core Perl API and SQL schema dankogai/p5-encode&nb...2500 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide...e object system to provide great APIs for extension and further de...nbsp;sits on top of DBI to provide an API to your database based on the...rks and content management systems to APIs for we...2332 days ago
List of visualization tools for network biology
...c.be/neat/ Ondex Data integration and visualization of...truction, data visualization, integration of various data types, networ...b tools for network analysis APID Unified protein-protein inter...http://bioinfow.dep.usal.es/apid/ Arcadia Translates text-bas...2299 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for showing final results but also for im...ng analysis protocols, testing data quality, and generating result drafts. Its integration in analysis pipelines allows...2295 days ago