List of visualization tools for genome alignments
...l SAMtools tview Simple and fast text alignment viewer; NGS compatible http://www.htslib.org/ SEWAL Uses a locality-sensitive hashing algorithm to enumerate all unique seque...2283 days ago
Gap filling or Contigs extensions tools !
...r to miss the point that you aren't interested in assembling the full genome, just the 100 kb part you're interested in. I suggest the following algorithm: 1. Start with the initial...2165 days ago
Frequent parameters for bioinformatics tools !
...e_score: 0 Pbalign.task_options.min_length: 50 Pbalign.task_options.algorithm_options: --minMatch 12 --bes...ptions.HGAP_AggressiveAsm_bool: false Genomic_consensus.task_options.algorithm: best falcon_ns.task_options...1285 days ago
Mitochondrial genome assembly tools !
Mitochondrial genome assembly tools are specialized software and algorithms designed to accurately reconstruc...anelle genomes, including mitochondria. It utilizes a seed-and-extend algorithm and is suitable for both shor...242 days ago