Results for "Algorithm Analysis"
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Microbiome analysis using a single application MEGAN6...d in one application. Taxonomic analysis using the NCBI taxonomy or a...taxonomy such as SILVA Functional analysis using InterPro2GO, SEED, eggN...ns of sequencing reads. Blast-like analysis can be performed using DIAMON...2853 days ago
- This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content suitabl...Applications: De Novo Assembly Transcriptome analysis Base Modification Analysis...
2639 days ago
- KisSplice is a software that enables to analyse RNA-seq dat...possible post-treatments meant to facilitate the analysis of the results. The choice of...riptome and on the need to perform a differential analysis, as summarised in the followi...
2831 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1238 days ago
- Faster, more accurate algorithms function prediction "GeneMANIA (Multiple Association Network Integration Algorithm)" have however been developed in recent years and are publicly available on the web, indicating the future direction of function prediction.
2825 days ago
- Recent technological progress has greatly facilitated de novo genome sequenci...rming and improving the quality of such assemblies is critical for subsequent analysis. Visualization and qua...
2823 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (h...folding. OPERA is based on an exact algorithm that is guaranteed to minimiz...including refinements to its basic algorithm (to reduce local errors, impr...ipt describing the new features and algorith...2807 days ago
- The Sybil software package provides a primarily web-based front-end to comparative geno...Park to support a number of research projects that involve comparative genome analysis. The following sections provi...
2809 days ago
- Development of cancer is driven by somatic alterations, including numerical and structura...at were previously pinpointed by the segmentation algorithm that was applied to obtain CN...eal recurrent breakpoint events. This easy-to-use algorith...
2166 days ago
- ...line is a flexible and powerful tool for the analysis of miRNA (or more generall sho...mentation MIRO is especially adapted for the analysis of reads generated with the I...files and cluster reads using one of several algorithm. MIRO output is furthermore...
2782 days ago
