Software packages for next gen sequence analysis
...xt Generation Sequencing data analysis. * JMP Genomics - Next gen vis...ating with Lasergene Sequence Analysis software for additional analys...ents using the Smith-Waterman algorithm. Features a number of support...pecifically optimized for the analysis of large numbers (millions) o...3254 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to u...me one leading method in -omics data analysis and visualization. Followi...ww.biotapestry.org/ Caleydo Visual analysis framework targeted at biomole...PathVisio Biological pathway analysis software that allows drawing,...2299 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological f...nd quantitation of their volumes. PocketPicker Grid-based technique for the analysis of protein pockets. PocketPic...2214 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...can be directly imported for analysis.” Alignment feature: Su...m NCBI Ingenuity Variant Analysis (QIAGEN) allows for variant...lignment, variant calling and analysis of NGS data Supported workflo...re-mRNA splicing; combines 12 algorithms to identify mutations&rsquo...2921 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation &nbs...of using GeneSCF over other enrichment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2883 days ago
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Genome Assembly Tools and Software - PART1 !!
...ightweight Resources Assembly Algorithm Lightweight resources assembly algorithm for high-throughput sequencin...; DNA Sequence Assembly & Analysis DNA Sequence Assembler is r...uence assembly , DNA sequence analysis, contig editing, file format c...2697 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions t...hose actions are to be executed. An algorithm is merely the sequence of ste...uage that helps programmers develop algorithms. Pseudocode is a "text-based...e of pseudocode to elaborate on the algorith...2671 days ago
Awesome perl frameworks, libraries and software - PART 1
...s a modular IRC bot written in Perl. grantm/Algorithm-CouponCode - Perl librar...es for Next-Generation Sequencing (NGS) data analysis masukomi/jsonpath-perl ...erl Framework for High Throughput Sequencing analysis gbarr/perl-libnet - per...2501 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in tw...diagram, resulting from a cladistic analysis, which depicts a hypothetical...methods. ingroup -- In a cladistic analysis, the set of taxa which are hy...es of characters used in a cladistic analysis, either original or derived....2474 days ago