Results for "Analysis of up/dawn-regulation of brain products and its carcinogenic effects on peripheral cells"
Bookmarks
SAMtools: Primer / Tutorial by Ethan Cerami, Ph.D.keywords: samt...3: First public release on biobits.org. 1.1: J...p; Updated to use samtools 1.1 and bcftools...ed in next-generation sequence analysi...s an introduction to SAMtools, and is gea...ew to next-generation sequence analy...2884 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. promoters and enhancers) at distal genomic...n DNA regions, e.g., ChIA-PET and HiC, can...With the increasing diversity and com...ork theory approaches for the analysis o...ks with user-provided private and p...
2880 days ago
- CSBB is a command line based bioinformatics suite to analyze...d in Perl, while it also leverages the use of R and pyt...or focus of CSBB is to allow users from biology and bioinf...ity, to get benefited by performing down-stream analy...
2878 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitud...USCLE >Multiple sequence alignment. Faster and mor...ALW. UPARSE >OTU clustering for 16S and other...Selected multiple alignment benchmarks in a standar...2872 days ago
- Microbiome analysis using a single application MEGAN6 is a com...one application. Taxonomic analysis using the NCBI taxonomy...ord clouds, Voronoi tree maps and many other charts PCoA, clustering and net...sequencing reads. Blast-like analysis c...arge range of analysis tools, and i...
2852 days ago
- This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content...re links to training modules (webinars and Pow...ns: De Novo Assembly Transcriptome analysis...g Data Analysis Tools Minor Variants and P...
2638 days ago
- KisSplice is a software that enables to analyse RNA-seq data wi...lows to identify SNPs, indels and alternative splicing events....ber of biological conditions, and will quantify each variant in...a datasets of up to 1G reads. Its memory c...eference genome/transcriptome and on the...
2830 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1237 days ago
- Most variant calling pipelines result in files containing large quantities of variant informa...popular format for this data. The format of these files and their...o facilitate this filtering as well as to visualize the effec...
2827 days ago
- Recent technological progress has greatly fa...uous sequence (contigs) arranged in thousands of scaf...small numbers of chromosomes. Confirming and imp...ch assemblies is critical for subsequent analysis.&...Xenarios & Wurm (2011) Visualization and q...
2822 days ago
