Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
To install BioPerl on a macOS system, you can follow these steps: Open the Terminal app on your macOS system. Install Homebrew if you haven't already...433 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...rest. Obtain the genome sequences: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl. Gene annotation: Annotate the genes in each g...434 days ago
Comment on "Basic command-line to run BLAST"
...rall, BLAST is a powerful tool for searching sequence databases and can be used for many different types of analyses, including gene annotation, functional annotation, and comparative genomics....434 days ago
Comment on "List of gene ontology software and tools"
GeneSCF serves as command line tool for clustering list of genes based on functional annotation (Geneontology, KEGG, REACTOME and NCG). This tool requires gene list in the form of Entrez Gene IDs or Official gene symbols as a input. http://genescf.kandurilab.org/1503 days ago
1531 days ago
Comment on "Running Trinity on RNA-seq !"
...ipts using Trinotate. If your organism has an assembled genome, consider using the Trinity transcriptome assemblies for gene structure annotation using PASA....2134 days ago
2645 days ago
2672 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2739 days ago
Comment on "List of gene ontology software and tools"
http://bioinformaticsonline.com/blog/view/28037/tool-gene-set-clustering-based-on-functional-annotation-genescf2883 days ago