Results for "Approach"
Comments
Comment on "Short-read assembly using Spades !"
...of conserved genes. Iterative assembly: If the quality of the initial assembly is not satisfactory, SPAdes allows for an iterative assembly approach where the output from the pre...417 days ago
- ...or free download. PIRS: PIRS (short for Profile-based Illumina pair-end Reads Simulator) is a short read simulator that uses a profile-based approach to generate synthetic reads....
417 days ago
Comment on "Tools for RNA classification"
...is a popular tool for RNA classification that uses a covariance model approach to identify RNA homologs. It...genomic sequences. It uses a combination of HMM-based and BLAST-based approaches to identify rRNA sequences....423 days ago
Comment on "Sibelia: A comparative genomics tool"
...-s <loose|fine|far> or --parameters <loose|fine> This option is incompatible with "-k", you must specify one of these, not both. Approach used in "Sibelia" is paramete...1287 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...ithm should be used for alignment. Options are: sg - Myers' bit-vector approach. Semiglobal. Edit dist. align.... Uses Gotoh global alignment to align between anchors. [anchor] -w, --approach STR Additional alignment appr...2294 days ago
Comment on "BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries"
One more intersting approach by Sonal Singhal @ https://github.com/CGRL-QB3-UCBerkeley/denovoTargetCapturePopGen/blob/master/2-ScrubReads2316 days ago
Comment on "Structural variation: the hidden genomic treasure"
...ydra-SV The pipeline described below is meant to convey a general approach that they have found to be ef...ering SV breakpoints with Hydra. However, it should be noted that this approach seeks to discover breakpoints...2705 days ago
Comment on "Worldwide funding agencies to fund your bioinformatics research !!"
...m abroad who have completed their doctorates within the last six years are eligible to apply. The award targets outstanding talent and a creative approach to research. The Humboldt Fo...2937 days ago
Comment on "List of popular bioinformatics software/tools"
ARYANA: Aligning Reads by Yet Another Approach http://www.biomedcentral.com/1471-2105/15/S9/S12/abstract3525 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
I would recommend python and lower level language C because of easier syntax and simple oops approach. Moreover, I do a lot of boinformatics programming, but I don’t use any of t...3533 days ago
