BOL: Results for "Archaea"

Results for "Archaea"

- Abhimanyu Singh@abhimanyu
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S)....
2547 days ago
- Jit@jit.aber
Lifemap
...and panning. The current tree contains ALL species present in NCBI taxonomy as of October 18th, 2016: 1,135,169 species including 10,545 Archaea, 418,777 Bacteria and 705,847...
2580 days ago

- Jitendra Narayan@admin
Genomics for Bioinformatician
...isible Genetics OpenGene sequencers can create. Glimmer A system for finding genes in microbial DNA, especially the genomes of bacteria and archaea.Glimmer (Gene Locator and Int...
3940 days ago

- Rahul Nayak@rahul
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...al for correctly identifying and classifying prokaryotic (bacteria and archaea) and fungal samples. To provi...; *16S ribosomal RNA (Bacteria and Archaea) &nb...
1531 days ago

- Jit@jit.aber
Download the genome from NCBI using bash script/command
...d -r 's|(ftp://ftp.ncbi.nlm.nih.gov/genomes/all/.+/)(GCF_.+)|\1\2/\2_genomic.fna.gz|' > genomic_file_plant # -for archaea curl 'ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/archaea/assembly_summary.txt' | awk '...
2529 days ago
- Rahul Nayak@rahul
Download the gff files from NCBI using bash script/command
...d -r 's|(ftp://ftp.ncbi.nlm.nih.gov/genomes/all/.+/)(GCF_.+)|\1\2/\2_genomic.gff.gz|' > genomic_file_plant # -for archaea curl 'ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/archaea/assembly_summary.txt' | awk '...
2520 days ago

- Jit@jit.aber
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Useful bacterial gene synteny explorer @ http://archaea.u-psud.fr/synttax/ and http://archaea.u-psud.fr/absynte/
2725 days ago