String graph based genome assembly software and tools !
...son, the developer of ABySS assembler and Richard Durbin. iii)...ring graph: 1.SGA (String Graph Assembler) https://github.com/jts/...ome assembly. As opposed to most assemblers, which are de Bruijn graph b...m/lh3/fermi/ Fermi is a de novo assembler with a particular focus on as...2321 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...length, which offers great prospects for genome assembly. Generally, assemblers are based on several differe...ttps://sourceforge.net/projects/phusion2/files/smis/ List of assemblers for Oxford Nanopore MinION l...2313 days ago
CANU genome assembly parameters !
...everything that could be assembled and is part of the primary assembly The basic stats of assembly can be read from reports generated by the assembler, or calculated using standard...1938 days ago
Software for genome assembly !
...Falcon https://github.com/PacificBiosciences/pb-assembly 2 Canu assembler http://canu.readthedocs.io/en/latest/index.html 3 Miniasm assembler https://github.com/lh3/minias...1337 days ago