Results for "Automatically"
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Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts3369 days ago
- In machine learning, computers apply statistical learning techniques to automatically identify patterns in data. These techniques can be used to make highly accurate predictions. More at http://www.r2d3.us/visual-intro-to-machine-learning-part-1/
3212 days ago
- ...enomes and to create genome databases. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into g...
3018 days ago
- Pilon is a software tool which can be used to: Automatically improve draft assemblies Find variation among strains, including large event detection Pilon requires as input a FASTA...
3017 days ago
REAPR: a universal tool for genome assembly evaluation
...ly using mapped paired end reads, without the use of a reference genome for comparison. It can be used in any stage of an assembly pipeline to automatically break incorrect scaffolds and...2959 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
...otein coding genes, non-coding genes, or neutral sequences. Satsuma does not require any pre-processing, such as repeat masking, since it will automatically detect ambiguous mappings. S...2923 days ago
- ...fiers from one database to other database identifiers or annotations. To use db2db select the input type of your data, changing the input type automatically changes the output options to...
2902 days ago
- In machine learning, computers apply statistical learning techniques to automatically identify patterns in data. These techniques can be used to make highly accurate prediction...
2873 days ago
- ...q, formatdb and fastacmd), PAML (including codeml and yn00) and KaKs_Calculator (including 10 substitution rate estimation methods). gKaKs can automatically detect and eliminate frameshi...
2814 days ago
- ...e assembly, that should be less fragmented and with total size smaller than the input contigs. In addition, Redundans will automatically close the gaps resu...
2812 days ago
