1983 days ago
Biotite: A general framework for computational biology
The package is open source and freely available...ithub.com/biotite-dev/biotite). This package is simple to use especially f...n. Biotite consists of four sub packages: sequence, structure, databa...ftware. The Biotite package bundles popular tasks in comp...1982 days ago
Versatile genome assembly evaluation with QUAST-LG
QUAST-LG is an extension of QUAST intended for evaluating large-scale genome ass...mblies (up to mammalian-size). QUAST-LG is included in the QUAST package starting from version 5.0.0 (...1978 days ago
GeneOverlap: An R package to test and visualize gene overlaps
Overlapping gene lists can reveal biological meanings and may lead to novel hypotheses. For example, histone modification is an important cellular mechanism that can pa...1972 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing da...http://sourceforge.net/projects/excavatortool/.EXCAVATOR is a novel software package for the detection of copy num...1964 days ago
Quick tour of Genetic Algorithms !
The R package GA provides a collection of general pur...ns for optimization using genetic algorithms. The package includes a flexible set of to...em at hand. https://cran.r-project.org/web/packages/GA/vignettes/GA.html1951 days ago
UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
UpSetR generates static UpSet plots. The UpSet technique visualizes set intersec...app. Here is the source code for the shiny wrapper. A Python package called py-upset&nbs...1940 days ago
plumber:An R package that converts your existing R code to a web API
plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back...1896 days ago
DISTRUCT: a program for the graphical display of population structure
distruct is a program that can be used to graphically display results produced by the...clusers, colors, and other graphical details. [Example] [Download software package (includes the manual)] (you w...1884 days ago
OMTools: a software package for visualizing and processing optical mapping data
OMTools, an efficient and intuitive data processing and visualization suite to handle and explore large-scale optical mapping profiles. OMTools includes modules for vis...1880 days ago